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Gene: Spop (speckle type BTB/POZ protein) Rattus norvegicus
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Symbol: Spop
Name: speckle type BTB/POZ protein
Description: Predicted to have RNA polymerase II transcription factor binding activity and ubiquitin protein ligase binding activity. Predicted to be involved in several processes, including glucose homeostasis; positive regulation of apoptotic process; and regulation of transcription, DNA-templated. Predicted to localize to the Cul3-RING ubiquitin ligase complex; cytoplasm; and nuclear speck. Orthologous to human SPOP (speckle type BTB/POZ protein); PARTICIPATES IN Hedgehog signaling pathway; INTERACTS WITH bisphenol A; flutamide; ochratoxin A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC287643; speckle-type POZ protein
Orthologs:
Homo sapiens (human) : SPOP (speckle type BTB/POZ protein)  HGNC  Alliance
Mus musculus (house mouse) : Spop (speckle-type BTB/POZ protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Spop (speckle type BTB/POZ protein)
Pan paniscus (bonobo/pygmy chimpanzee) : SPOP (speckle type BTB/POZ protein)
Canis lupus familiaris (dog) : SPOP (speckle type BTB/POZ protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Spop (speckle type BTB/POZ protein)
Sus scrofa (pig) : SPOP (speckle type BTB/POZ protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01083,231,187 - 83,311,987 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01083,040,592 - 83,121,901 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41084,099,990 - 84,185,130 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11084,102,831 - 84,199,894 (+)NCBI
Celera1079,129,126 - 79,210,141 (+)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Spop
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311613
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-06-11
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.