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Gene: Prdm8 (PR/SET domain 8) Rattus norvegicus
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Symbol: Prdm8
Name: PR/SET domain 8
Description: Predicted to have chromatin binding activity; histone methyltransferase activity (H3-K9 specific); and transcription corepressor activity. Predicted to be involved in several processes, including cell morphogenesis; histone H3-K9 methylation; and oligodendrocyte development. Predicted to localize to the nucleus. Human ortholog(s) of this gene implicated in progressive myoclonus epilepsy. Orthologous to human PRDM8 (PR/SET domain 8); PARTICIPATES IN histone modification pathway; INTERACTS WITH 17beta-estradiol (ortholog); 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog); 2,2',5,5'-tetrachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC305198; PR domain 8; PR domain containing 8; PR domain zinc finger protein 8
Orthologs:
Homo sapiens (human) : PRDM8 (PR/SET domain 8)  HGNC  Alliance
Mus musculus (house mouse) : Prdm8 (PR domain containing 8)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prdm8 (PR/SET domain 8)
Pan paniscus (bonobo/pygmy chimpanzee) : PRDM8 (PR/SET domain 8)
Canis lupus familiaris (dog) : PRDM8 (PR/SET domain 8)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prdm8 (PR/SET domain 8)
Sus scrofa (pig) : PRDM8 (PR/SET domain 8)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01413,052,776 - 13,073,583 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01412,997,401 - 13,016,208 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41412,792,168 - 12,800,272 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11412,794,475 - 12,847,649 (-)NCBI
Celera1411,478,154 - 11,498,957 (-)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Prdm8
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311628
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.