Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Kmt5b (lysine methyltransferase 5B) Rattus norvegicus
Analyze
Symbol: Kmt5b
Name: lysine methyltransferase 5B
Description: Predicted to have histone methyltransferase activity (H4-K20 specific). Predicted to be involved in histone H4-K20 methylation. Predicted to localize to the condensed nuclear chromosome, centromeric region. Human ortholog(s) of this gene implicated in autosomal dominant mental retardation 51. Orthologous to human KMT5B (lysine methyltransferase 5B); PARTICIPATES IN histone modification pathway; lysine degradation pathway; INTERACTS WITH bisphenol A; C60 fullerene; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: histone-lysine N-methyltransferase KMT5B; histone-lysine N-methyltransferase SUV420H1; LOC361688; lysine (K)-specific methyltransferase 5B; lysine-specific methyltransferase 5B; su(var)4-20 homolog 1; suppressor of variegation 4-20 homolog 1; suppressor of variegation 4-20 homolog 1 (Drosophila); suv4-20h1; Suv420h1
Orthologs:
Homo sapiens (human) : KMT5B (lysine methyltransferase 5B)  HGNC  Alliance
Mus musculus (house mouse) : Kmt5b (lysine methyltransferase 5B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Kmt5b (lysine methyltransferase 5B)
Pan paniscus (bonobo/pygmy chimpanzee) : KMT5B (lysine methyltransferase 5B)
Canis lupus familiaris (dog) : KMT5B (lysine methyltransferase 5B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Kmt5b (lysine methyltransferase 5B)
Sus scrofa (pig) : KMT5B (lysine methyltransferase 5B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01219,000,844 - 219,050,211 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01225,874,424 - 225,923,708 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41206,285,303 - 206,341,955 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11206,463,795 - 206,494,080 (+)NCBI
Celera1198,553,658 - 198,602,986 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Kmt5b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311637
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.