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Gene: Smtnl1 (smoothelin-like 1) Rattus norvegicus
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Symbol: Smtnl1
Name: smoothelin-like 1
Description: Predicted to have several functions, including calmodulin binding activity; protein domain specific binding activity; and protein phosphatase 1 binding activity. Predicted to be involved in several processes, including peptidyl-serine phosphorylation; regulation of blood vessel diameter; and response to activity. Predicted to localize to the intracellular non-membrane-bounded organelle and nucleus. Orthologous to human SMTNL1 (smoothelin like 1); INTERACTS WITH bisphenol A; C60 fullerene; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC311167; RGD1311701; similar to RIKEN cDNA 1110030K22; smoothelin-like protein 1
Orthologs:
Homo sapiens (human) : SMTNL1 (smoothelin like 1)  HGNC  Alliance
Mus musculus (house mouse) : Smtnl1 (smoothelin-like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smtnl1 (smoothelin like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SMTNL1 (smoothelin like 1)
Canis lupus familiaris (dog) : SMTNL1 (smoothelin like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smtnl1 (smoothelin like 1)
Sus scrofa (pig) : SMTNL1 (smoothelin like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0372,207,150 - 72,219,209 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0378,728,182 - 78,740,150 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4368,017,296 - 68,025,299 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1367,913,666 - 67,921,671 (-)NCBI
Celera369,248,302 - 69,252,187 (-)NCBICelera
Cytogenetic Map3q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Smtnl1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311701
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.