Gene: Rgp1 (RGP1 homolog, RAB6A GEF complex partner 1) Rattus norvegicus
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Symbol: Rgp1
Name: RGP1 homolog, RAB6A GEF complex partner 1
Description: Predicted to have Rab guanyl-nucleotide exchange factor activity; predicted to be involved in negative regulation of cellular protein catabolic process, positive regulation of GTPase activity, and retrograde transport, endosome to Golgi; predicted to localize to the cytoplasm and plasma membrane; orthologous to human RGP1 (RGP1 homolog, RAB6A GEF complex partner 1); INTERACTS WITH (RS)-amphetamine; 2,3,7,8-tetrachlorodibenzodioxine; finasteride.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC313493; RAB6A-GEF complex partner protein 2; RGD1311757; RGP1 retrograde golgi transport homolog; RGP1 retrograde golgi transport homolog (S. cerevisiae); similar to hypothetical protein F730001J03
Orthologs:
Homo sapiens (human) : RGP1 (RGP1 homolog, RAB6A GEF complex partner 1)  HGNC  Alliance
Mus musculus (house mouse) : Rgp1 (RAB6A GEF compex partner 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rgp1 (RGP1 homolog, RAB6A GEF complex partner 1)
Pan paniscus (bonobo/pygmy chimpanzee) : RGP1 (RGP1 homolog, RAB6A GEF complex partner 1)
Canis lupus familiaris (dog) : RGP1 (RGP1 homolog, RAB6A GEF complex partner 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rgp1 (RGP1 homolog, RAB6A GEF complex partner 1)
Sus scrofa (pig) : RGP1 (RGP1 homolog, RAB6A GEF complex partner 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0559,080,290 - 59,088,777 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0563,604,879 - 63,613,371 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4560,057,647 - 60,061,853 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1560,057,331 - 60,063,791 (+)NCBI
Celera556,415,170 - 56,423,657 (+)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Rgp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311757
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.