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Gene: Tpcn2 (two pore segment channel 2) Rattus norvegicus
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Symbol: Tpcn2
Name: two pore segment channel 2
Description: Predicted to have calcium channel activity; identical protein binding activity; and protein kinase binding activity. Involved in response to vitamin D. Predicted to localize to the endosome membrane and lysosomal membrane. Orthologous to human TPCN2 (two pore segment channel 2); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC309139; two pore calcium channel protein 2
Orthologs:
Homo sapiens (human) : TPCN2 (two pore segment channel 2)  HGNC  Alliance
Mus musculus (house mouse) : Tpcn2 (two pore segment channel 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tpcn2 (two pore segment channel 2)
Pan paniscus (bonobo/pygmy chimpanzee) : TPCN2 (two pore segment channel 2)
Canis lupus familiaris (dog) : TPCN2 (two pore segment channel 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tpcn2 (two pore segment channel 2)
Sus scrofa (pig) : TPCN2 (two pore segment channel 2)
more info ...
Allele / Splice: Tpcn2em1Mcwi  
Genetic Models: SS-Tpcn2em1Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01218,419,182 - 218,448,902 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01225,286,480 - 225,316,685 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41205,702,971 - 205,732,664 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11205,857,086 - 205,886,037 (-)NCBI
Celera1197,971,266 - 198,000,753 (-)NCBICelera
Cytogenetic Map1q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tpcn2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311779
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.