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Gene: Mysm1 (myb-like, SWIRM and MPN domains 1) Rattus norvegicus
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Symbol: Mysm1
Name: myb-like, SWIRM and MPN domains 1
Description: Predicted to have histone binding activity; peptidase activity; and transcription coactivator activity. Predicted to be involved in several processes, including chromatin organization; pigmentation; and regulation of hair follicle development. Predicted to localize to the nucleoplasm; plasma membrane; and protein-containing complex. Human ortholog(s) of this gene implicated in diabetic retinopathy. Orthologous to human MYSM1 (Myb like, SWIRM and MPN domains 1); PARTICIPATES IN histone modification pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: MODEL
Also known as: histone H2A deubiquitinase MYSM1; LOC298247; RGD1311787; similar to KIAA1915 protein
Orthologs:
Homo sapiens (human) : MYSM1 (Myb like, SWIRM and MPN domains 1)  HGNC  Alliance
Mus musculus (house mouse) : Mysm1 (myb-like, SWIRM and MPN domains 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Mysm1 (Myb like, SWIRM and MPN domains 1)
Pan paniscus (bonobo/pygmy chimpanzee) : MYSM1 (Myb like, SWIRM and MPN domains 1)
Canis lupus familiaris (dog) : MYSM1 (Myb like, SWIRM and MPN domains 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Mysm1 (Myb like, SWIRM and MPN domains 1)
Sus scrofa (pig) : MYSM1 (Myb like, SWIRM and MPN domains 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05113,902,115 - 113,939,083 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05117,841,917 - 117,892,263 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45115,249,981 - 115,282,319 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15115,255,206 - 115,362,678 (-)NCBI
Celera5108,403,783 - 108,440,731 (-)NCBICelera
Cytogenetic Map5q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Mysm1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311787
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.