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Gene: Tmcc1 (transmembrane and coiled-coil domain family 1) Rattus norvegicus
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Symbol: Tmcc1
Name: transmembrane and coiled-coil domain family 1
Description: Predicted to have protein heterodimerization activity and protein homodimerization activity. Predicted to be involved in several processes, including endosome fission; endosome membrane tubulation; and protein complex oligomerization. Predicted to localize to the cytosol; endoplasmic reticulum-endosome membrane contact site; and rough endoplasmic reticulum. Orthologous to human TMCC1 (transmembrane and coiled-coil domain family 1); INTERACTS WITH (+)-schisandrin B; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: MODEL
Also known as: hypothetical LOC312654; LOC312654; RGD1311909; transmembrane and coiled coil domains 1; transmembrane and coiled-coil domains protein 1
Orthologs:
Homo sapiens (human) : TMCC1 (transmembrane and coiled-coil domain family 1)  HGNC  Alliance
Mus musculus (house mouse) : Tmcc1 (transmembrane and coiled coil domains 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tmcc1 (transmembrane and coiled-coil domain family 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TMCC1 (transmembrane and coiled-coil domain family 1)
Canis lupus familiaris (dog) : TMCC1 (transmembrane and coiled-coil domain family 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tmcc1 (transmembrane and coiled-coil domain family 1)
Sus scrofa (pig) : TMCC1 (transmembrane and coiled-coil domain family 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04147,920,987 - 148,048,852 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04211,204,426 - 211,373,620 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44152,146,733 - 152,276,732 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4137,958,696 - 138,128,882 (-)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tmcc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311909
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.