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Gene: Nup85 (nucleoporin 85) Rattus norvegicus
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Symbol: Nup85
Name: nucleoporin 85
Description: Predicted to be a structural constituent of nuclear pore. Predicted to be involved in several processes, including lamellipodium assembly; macrophage chemotaxis; and nucleocytoplasmic transport. Localizes to the nucleus. Predicted to colocalize with the kinetochore. Human ortholog(s) of this gene implicated in nephrotic syndrome type 17. Orthologous to human NUP85 (nucleoporin 85); PARTICIPATES IN mRNA nuclear export pathway; RNA transport pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 85 kDa nucleoporin; LOC287830; nuclear pore complex protein Nup85; nucleoporin 85kDa; nucleoporin NUP85; Pcnt1; pericentrin 1; pericentrin-1
Orthologs:
Homo sapiens (human) : NUP85 (nucleoporin 85)  HGNC  Alliance
Mus musculus (house mouse) : Nup85 (nucleoporin 85)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nup85 (nucleoporin 85)
Canis lupus familiaris (dog) : NUP85 (nucleoporin 85)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nup85 (nucleoporin 85)
Sus scrofa (pig) : NUP85 (nucleoporin 85)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010104,118,999 - 104,137,258 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010104,144,378 - 104,162,637 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410105,645,505 - 105,665,079 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.110105,660,008 - 105,679,580 (+)NCBI
Celera1099,381,083 - 99,399,472 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Nup85
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311942
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.