Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Slc27a6 (solute carrier family 27 member 6) Rattus norvegicus
Analyze
Symbol: Slc27a6
Name: solute carrier family 27 member 6
Description: Predicted to have long-chain fatty acid transporter activity; long-chain fatty acid-CoA ligase activity; and very long-chain fatty acid-CoA ligase activity. Predicted to be involved in long-chain fatty acid metabolic process and long-chain fatty acid transport. Predicted to localize to the integral component of membrane. Biomarker of myocardial infarction. Orthologous to human SLC27A6 (solute carrier family 27 member 6); PARTICIPATES IN eicosanoid signaling pathway via peroxisome proliferator-activated receptor gamma; INTERACTS WITH bisphenol A; furan; genistein.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC291582; long-chain fatty acid transport protein 6; solute carrier family 27 (fatty acid transporter), member 6
Orthologs:
Homo sapiens (human) : SLC27A6 (solute carrier family 27 member 6)  HGNC  Alliance
Mus musculus (house mouse) : Slc27a6 (solute carrier family 27 (fatty acid transporter), member 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc27a6 (solute carrier family 27 member 6)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC27A6 (solute carrier family 27 member 6)
Canis lupus familiaris (dog) : SLC27A6 (solute carrier family 27 member 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc27a6 (solute carrier family 27 member 6)
Sus scrofa (pig) : SLC27A6 (solute carrier family 27 member 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01853,609,497 - 53,667,833 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01852,825,799 - 52,891,779 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41854,351,476 - 54,412,298 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1850,159,252 - 50,211,328 (+)NCBICelera
Cytogenetic Map18q12.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Slc27a6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311977
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.