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Gene: Cgn (cingulin) Rattus norvegicus
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Symbol: Cgn
Name: cingulin
Description: Predicted to have microtubule binding activity. Predicted to be involved in bicellular tight junction assembly; epithelial cell morphogenesis; and microtubule cytoskeleton organization. Predicted to localize to the bicellular tight junction; brush border; and plasma membrane. Orthologous to human CGN (cingulin); INTERACTS WITH (+)-schisandrin B; 1,3-dinitrobenzene; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC310655
Orthologs:
Homo sapiens (human) : CGN (cingulin)  HGNC  Alliance
Mus musculus (house mouse) : Cgn (cingulin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cgn (cingulin)
Pan paniscus (bonobo/pygmy chimpanzee) : CGN (cingulin)
Canis lupus familiaris (dog) : CGN (cingulin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cgn (cingulin)
Sus scrofa (pig) : CGN (cingulin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02195,909,691 - 195,937,130 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2195,909,626 - 195,935,878 (-)Ensembl
Rnor_5.02215,388,309 - 215,415,608 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42189,645,082 - 189,670,491 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12189,598,427 - 189,623,829 (-)NCBI
Celera2174,853,719 - 174,881,121 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cgn
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311992
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.