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Gene: Ms4a1 (membrane spanning 4-domains A1) Rattus norvegicus
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Symbol: Ms4a1
Name: membrane spanning 4-domains A1
Description: Exhibits epidermal growth factor receptor binding activity. Predicted to be involved in several processes, including B cell receptor signaling pathway; calcium ion transport; and protein tetramerization. Predicted to localize to external side of plasma membrane; nucleoplasm; and plasma membrane raft. Biomarker of glomerulonephritis. Human ortholog(s) of this gene implicated in common variable immunodeficiency. Orthologous to human MS4A1 (membrane spanning 4-domains A1); INTERACTS WITH 1-naphthyl isothiocyanate; bisphenol A; gentamycin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: B-lymphocyte antigen CD20; LOC309217; membrane-spanning 4-domains, subfamily A, member 1
Orthologs:
Homo sapiens (human) : MS4A1 (membrane spanning 4-domains A1)  HGNC  Alliance
Mus musculus (house mouse) : Ms4a1 (membrane-spanning 4-domains, subfamily A, member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ms4a1 (membrane spanning 4-domains A1)
Pan paniscus (bonobo/pygmy chimpanzee) : MS4A1 (membrane spanning 4-domains A1)
Canis lupus familiaris (dog) : MS4A1 (membrane spanning 4-domains A1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ms4a1 (membrane spanning 4-domains A1)
Sus scrofa (pig) : MS4A1 (membrane spanning 4-domains A1)
Chlorocebus sabaeus (African green monkey) : MS4A1 (membrane spanning 4-domains A1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01227,429,241 - 227,441,492 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1227,429,596 - 227,441,442 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01234,494,128 - 234,506,370 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41213,763,696 - 213,770,756 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11213,921,879 - 213,934,027 (-)NCBI
Celera1205,381,782 - 205,388,842 (-)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ms4a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311999
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.