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Gene: Sox15 (SRY-box transcription factor 15) Rattus norvegicus
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Symbol: Sox15
Name: SRY-box transcription factor 15
CRRD ID: 1312022
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in several processes, including positive regulation of G0 to G1 transition; regulation of transcription by RNA polymerase II; and trophoblast giant cell differentiation. Predicted to localize to cytoplasm; nucleus; and transcription regulator complex. Orthologous to human SOX15 (SRY-box transcription factor 15); INTERACTS WITH bisphenol A; 2,2',4,4'-Tetrabromodiphenyl ether (ortholog); 2,3',4,4',5-Pentachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC363632; protein SOX-15; SRY (sex determining region Y)-box 15; SRY box 15; SRY-box containing gene 15
Orthologs:
Homo sapiens (human) : SOX15 (SRY-box transcription factor 15)  HGNC  Alliance
Mus musculus (house mouse) : Sox15 (SRY (sex determining region Y)-box 15)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sox15 (SRY-box transcription factor 15)
Pan paniscus (bonobo/pygmy chimpanzee) : SOX15 (SRY-box transcription factor 15)
Canis lupus familiaris (dog) : SOX15 (SRY-box transcription factor 15)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sox15 (SRY-box transcription factor 15)
Sus scrofa (pig) : SOX15 (SRY-box transcription factor 15)
Chlorocebus sabaeus (African green monkey) : SOX15 (SRY-box transcription factor 15)
Heterocephalus glaber (naked mole-rat) : Sox15 (SRY-box transcription factor 15)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01056,260,514 - 56,263,503 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1056,260,514 - 56,263,503 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01056,006,152 - 56,009,141 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41056,473,056 - 56,476,045 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11056,486,448 - 56,487,721 (+)NCBI
Celera1053,528,127 - 53,531,116 (+)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sox15
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1312022
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.