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Gene: Pgam5 (PGAM family member 5, mitochondrial serine/threonine protein phosphatase) Rattus norvegicus
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Symbol: Pgam5
Name: PGAM family member 5, mitochondrial serine/threonine protein phosphatase
Description: Predicted to have GTPase activator activity and protein serine/threonine phosphatase activity. Predicted to be involved in several processes, including necroptotic process; negative regulation of cold-induced thermogenesis; and positive regulation of GTPase activity. Predicted to localize to the mitochondrion. Orthologous to human PGAM5 (PGAM family member 5, mitochondrial serine/threonine protein phosphatase); PARTICIPATES IN mitochondrial autophagy pathway; nuclear factor, erythroid 2 like 2 signaling pathway; INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC288731; phosphoglycerate mutase family member 5; RGD1312028; serine/threonine-protein phosphatase PGAM5, mitochondrial; similar to hypothetical protein MGC5352
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01252,467,417 - 52,474,533 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1252,467,450 - 52,474,511 (+)Ensembl
Rnor_5.01254,202,823 - 54,210,153 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41246,555,416 - 46,562,477 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11246,422,347 - 46,429,409 (+)NCBI
Celera1247,965,707 - 47,972,769 (+)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pgam5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1312028
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.