Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Lmx1a (LIM homeobox transcription factor 1 alpha) Mus musculus
Analyze
Symbol: Lmx1a
Name: LIM homeobox transcription factor 1 alpha
Description: Exhibits DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Involved in several processes, including memory; nervous system development; and olfactory behavior. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 7. Is expressed in several structures, including brain; ear; embryo ectoderm; genitourinary system; and notochord. Orthologous to human LMX1A (LIM homeobox transcription factor 1 alpha); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane; 4,4'-sulfonyldiphenol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: dr; dreher; LIM homeobox transcription factor 1-alpha; LIM/homeobox protein 1.1; LIM/homeobox protein LMX1A; LMX-1.1; Lmx1.1; MGC129356; MGC129357; shaker short-tail; sst
Orthologs:
Homo sapiens (human) : LMX1A (LIM homeobox transcription factor 1 alpha)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Lmx1a (LIM homeobox transcription factor 1 alpha)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lmx1a (LIM homeobox transcription factor 1 alpha)
Pan paniscus (bonobo/pygmy chimpanzee) : LMX1A (LIM homeobox transcription factor 1 alpha)
Canis lupus familiaris (dog) : LMX1A (LIM homeobox transcription factor 1 alpha)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lmx1a (LIM homeobox transcription factor 1 alpha)
Sus scrofa (pig) : LMX1A (LIM homeobox transcription factor 1 alpha)
Chlorocebus sabaeus (African green monkey) : LMX1A (LIM homeobox transcription factor 1 alpha)
Heterocephalus glaber (naked mole-rat) : Lmx1a (LIM homeobox transcription factor 1 alpha)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38 Ensembl1167,689,237 - 167,848,741 (+)EnsemblGRCm38mm10GRCm38
GRCm381167,688,230 - 167,848,741 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv371169,619,689 - 169,778,864 (+)NCBIGRCm37mm9NCBIm37
MGSCv361169,526,233 - 169,685,408 (+)NCBImm8
Celera1170,119,452 - 170,266,767 (+)NCBICelera
Cytogenetic Map1H2.3NCBI
cM Map175.08NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Lmx1a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1312427
Created: 2005-01-12
Species: Mus musculus
Last Modified: 2020-03-25
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.