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Gene: VPS39 (VPS39 subunit of HOPS complex) Homo sapiens
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Symbol: VPS39
Name: VPS39 subunit of HOPS complex
Description: Involved in several processes, including endosomal vesicle fusion; lysosomal transport; and retrograde transport, endosome to plasma membrane. Localizes to the HOPS complex; late endosome membrane; and lysosomal membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: FLJ21681; FLJ46546; hVam6p; KIAA0770; TLP; TRAP1-like protein; vacuolar protein sorting 39 homolog; VAM6; vam6/Vps39-like protein; VPS39 HOPS complex subunit; VPS39, HOPS complex subunit
Orthologs:
Mus musculus (house mouse) : Vps39 (VPS39 HOPS complex subunit)  MGI  Alliance
Rattus norvegicus (Norway rat) : Vps39 (VPS39 subunit of HOPS complex)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps39 (VPS39 subunit of HOPS complex)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS39 (VPS39 subunit of HOPS complex)
Canis lupus familiaris (dog) : VPS39 (VPS39 subunit of HOPS complex)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps39 (VPS39 subunit of HOPS complex)
Sus scrofa (pig) : VPS39 (VPS39 subunit of HOPS complex)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381542,158,701 - 42,208,331 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371542,450,899 - 42,500,524 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361540,238,191 - 40,287,794 (-)NCBINCBI36hg18NCBI36
Build 341540,238,191 - 40,287,794NCBI
Celera1519,218,602 - 19,268,201 (-)NCBI
Cytogenetic Map15q15.1NCBI
HuRef1519,299,375 - 19,348,651 (-)NCBIHuRef
CHM1_11542,569,358 - 42,618,991 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on VPS39
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1312537
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2019-11-26
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.