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Gene: Vps39 (VPS39 HOPS complex subunit) Mus musculus
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Symbol: Vps39
Name: VPS39 HOPS complex subunit
Description: Predicted to be involved in several processes, including endosomal vesicle fusion; lysosomal transport; and retrograde transport, endosome to plasma membrane. Colocalizes with the AP-3 adaptor complex. Orthologous to human VPS39 (VPS39 subunit of HOPS complex); INTERACTS WITH 1,1,1-trichloroethane; 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: A230065P22Rik; AW743070; mVam6; vacuolar protein sorting 39; vacuolar protein sorting 39 (yeast); Vam6; vam6/Vps39-like protein; Vam6P
Orthologs:
Homo sapiens (human) : VPS39 (VPS39 subunit of HOPS complex)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Vps39 (VPS39 subunit of HOPS complex)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps39 (VPS39 subunit of HOPS complex)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS39 (VPS39 subunit of HOPS complex)
Canis lupus familiaris (dog) : VPS39 (VPS39 subunit of HOPS complex)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps39 (VPS39 subunit of HOPS complex)
Sus scrofa (pig) : VPS39 (VPS39 subunit of HOPS complex)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm382120,316,461 - 120,353,142 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv372120,142,197 - 120,178,869 (-)NCBIGRCm37mm9NCBIm37
MGSCv362120,008,978 - 120,044,551 (-)NCBImm8
Celera2121,470,840 - 121,507,455 (-)NCBICelera
Cytogenetic Map2 E5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
Nomenclature History
 
More on Vps39
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1312538
Created: 2005-01-12
Species: Mus musculus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.