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Gene: Col13a1 (collagen, type XIII, alpha 1) Mus musculus
Symbol: Col13a1
Name: collagen, type XIII, alpha 1
Description: Predicted to have extracellular matrix structural constituent and heparin binding activity. Involved in endochondral ossification and morphogenesis of a branching structure. Localizes to the cell-cell junction. Used to study congenital myasthenic syndrome 19. Human ortholog(s) of this gene implicated in congenital myasthenic syndrome 19. Is expressed in several structures, including genitourinary system; heart and pericardium; jaw; musculoskeletal system; and respiratory system. Orthologous to human COL13A1 (collagen type XIII alpha 1 chain); PARTICIPATES IN syndecan signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: collagen alpha-1(XIII) chain; procollagen, type XIII, alpha 1; type XIII collagen
Homo sapiens (human) : COL13A1 (collagen type XIII alpha 1 chain)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Col13a1 (collagen type XIII alpha 1 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col13a1 (collagen type XIII alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL13A1 (collagen type XIII alpha 1 chain)
Canis lupus familiaris (dog) : COL13A1 (collagen type XIII alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col13a1 (collagen type XIII alpha 1 chain)
Sus scrofa (pig) : COL13A1 (collagen type XIII alpha 1 chain)
Chlorocebus sabaeus (green monkey) : COL13A1 (collagen type XIII alpha 1 chain)
Heterocephalus glaber (naked mole-rat) : Col13a1 (collagen type XIII alpha 1 chain)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm38 Ensembl1061,838,236 - 61,979,108 (-)Ensembl
GRCm381061,838,234 - 61,979,206 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv371061,301,246 - 61,441,856 (-)NCBIGRCm37mm9NCBIm37
MGSCv361061,233,855 - 61,374,465 (-)NCBImm8
Celera1062,940,611 - 63,081,159 (-)NCBICelera
Cytogenetic Map10 B4NCBI
cM Map1032.29NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status



Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
More on Col13a1
Alliance Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1312682
Created: 2005-01-12
Species: Mus musculus
Last Modified: 2019-12-18
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.