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Gene: Cln5 (ceroid-lipofuscinosis, neuronal 5) Mus musculus
Symbol: Cln5
Name: ceroid-lipofuscinosis, neuronal 5
CRRD ID: 1315880
Description: Predicted to have hydrolase activity, acting on glycosyl bonds and mannose binding activity. Involved in lysosome organization and visual perception. Localizes to lysosome and vacuolar lumen. Is expressed in several structures, including central nervous system; genitourinary system; liver; retina; and spleen. Used to study neuronal ceroid lipofuscinosis 5. Human ortholog(s) of this gene implicated in neuronal ceroid lipofuscinosis 5. Orthologous to human CLN5 (CLN5 intracellular trafficking protein); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: A730075N08Rik; ceroid-lipofuscinosis neuronal protein 5 homolog
Homo sapiens (human) : CLN5 (CLN5 intracellular trafficking protein)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Cln5 (CLN5, intracellular trafficking protein)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cln5 (CLN5 intracellular trafficking protein)
Pan paniscus (bonobo/pygmy chimpanzee) : CLN5 (CLN5 intracellular trafficking protein)
Canis lupus familiaris (dog) : CLN5 (CLN5 intracellular trafficking protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cln5 (CLN5 intracellular trafficking protein)
Sus scrofa (pig) : CLN5 (CLN5 intracellular trafficking protein)
Chlorocebus sabaeus (African green monkey) : CLN5 (CLN5 intracellular trafficking protein)
Heterocephalus glaber (naked mole-rat) : Cln5 (CLN5 intracellular trafficking protein)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm38.p6 Ensembl14103,070,216 - 103,077,628 (+)EnsemblGRCm38mm10GRCm38
GRCm3814103,070,216 - 103,077,630 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv3714103,469,433 - 103,476,847 (+)NCBIGRCm37mm9NCBIm37
MGSCv3614101,956,722 - 101,964,130 (+)NCBImm8
Celera14101,698,089 - 101,705,503 (+)NCBICelera
Cytogenetic Map14E2.3NCBI
cM Map1451.71NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status



Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
More on Cln5
Alliance Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1315880
Created: 2005-01-12
Species: Mus musculus
Last Modified: 2020-06-30
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.