Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: LSM8 (LSM8 homolog, U6 small nuclear RNA associated) Homo sapiens
Analyze
Symbol: LSM8
Name: LSM8 homolog, U6 small nuclear RNA associated
Description: Exhibits RNA binding activity. Involved in mRNA splicing, via spliceosome. Localizes to Lsm2-8 complex; U2-type precatalytic spliceosome; and U4/U6 x U5 tri-snRNP complex.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: FLJ33242; LSM8 U6 small nuclear RNA associated; MAK31-like protein; N-alpha-acetyltransferase 38, NatC auxiliary subunit; NAA38; U6 snRNA-associated Sm-like protein LSm8; YJR022W
Orthologs:
Mus musculus (house mouse) : Lsm8 (LSM8 homolog, U6 small nuclear RNA associated)  MGI  Alliance
Rattus norvegicus (Norway rat) : Lsm8 (LSM8 homolog, U6 small nuclear RNA associated)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lsm8 (LSM8 homolog, U6 small nuclear RNA associated)
Pan paniscus (bonobo/pygmy chimpanzee) : LSM8 (LSM8 homolog, U6 small nuclear RNA associated)
Canis lupus familiaris (dog) : LSM8 (LSM8 homolog, U6 small nuclear RNA associated)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lsm8 (LSM8 homolog, U6 small nuclear RNA associated)
Sus scrofa (pig) : LSM8 (LSM8 homolog, U6 small nuclear RNA associated)
Chlorocebus sabaeus (African green monkey) : LSM8 (LSM8 homolog, U6 small nuclear RNA associated)
Heterocephalus glaber (naked mole-rat) : Lsm8 (LSM8 homolog, U6 small nuclear RNA associated)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
NCBI Annotation Information: Note: The name of this locus was changed from NAA38 to LSM8 by the HUGO Gene Nomenclature Committee. [23 Jan 2014]
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl7118,184,144 - 118,204,035 (+)EnsemblGRCh38hg38GRCh38
GRCh387118,184,164 - 118,204,035 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh377117,824,086 - 117,844,093 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367117,611,322 - 117,620,116 (+)NCBINCBI36hg18NCBI36
Build 347117,418,169 - 117,426,827NCBI
Celera7112,633,566 - 112,653,561 (+)NCBI
Cytogenetic Map7q31.31NCBI
HuRef7112,190,045 - 112,210,037 (+)NCBIHuRef
CHM1_17117,757,651 - 117,777,658 (+)NCBICHM1_1
CRA_TCAGchr7v27117,219,509 - 117,239,504 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on LSM8
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1318211
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2020-06-18
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.