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Molecular Function
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Analyze GeneStrainQTL List |
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![]() Biological Process Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | proteolysis | | ISO | EMBL:BC031411 | 2290270 | (MGI:MGI:2669331, PMID:12759363) | GOC | MGI:MGI:2669331, PMID:12759363 | |
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1. | Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90. |
2. | Ko MS, etal., Development 2000 Apr;127(8):1737-49. |
3. | MGD data from the GO Consortium |
4. | Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73. |
5. | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
6. | RGD automated import pipeline for gene-chemical interactions |
PubMed | 10349636 10922068 11042159 11076861 12477932 12730221 12759362 12759363 12796513 12904583 14610273 14673145 15489334 16141072 16141073 17015433 18799693 21267068 25581363 |
Senp8 (Mus musculus - house mouse) |
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SENP8 (Homo sapiens - human) |
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Senp8 (Rattus norvegicus - Norway rat) |
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Senp8 (Chinchilla lanigera - long-tailed chinchilla) |
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SENP8 (Pan paniscus - bonobo/pygmy chimpanzee) |
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SENP8 (Canis lupus familiaris - dog) |
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Senp8 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SENP8 (Sus scrofa - pig) |
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RH136569 |
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UniSTS:236153 |
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The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
RefSeq Transcripts | NM_001172068 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001172069 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001172070 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001172071 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_027838 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC160637 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AK018606 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK029856 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK049120 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK136214 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BB522944 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC037443 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH466522 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CO431667 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
DV645349 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | NM_001172068 ⟹ NP_001165539 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
CCTTAAGTCTCACTTTCCGGCCAGTACAGAGCTCCCTGAAGGCTGGTTGGGTTGGTGAGGCCTGhide sequence |
RefSeq Acc Id: | NM_001172069 ⟹ NP_001165540 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
CCTTAAGTCTCACTTTCCGGCCAGTACAGAGCTCCCTGAAGGCTGGTTGGGTTGGTGAGGCCTGhide sequence |
RefSeq Acc Id: | NM_001172070 ⟹ NP_001165541 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
CCTTAAGTCTCACTTTCCGGCCAGTACAGAGCTCCCTGAAGGCTGGTTGGGTTGGTGAGGCCTGhide sequence |
RefSeq Acc Id: | NM_001172071 ⟹ NP_001165542 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
CCTTAAGTCTCACTTTCCGGCCAGTACAGAGCTCCCTGAAGGCTGGTTGGGTTGGTGAGGCCTGhide sequence |
RefSeq Acc Id: | NM_027838 ⟹ NP_082114 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
CCTTAAGTCTCACTTTCCGGCCAGTACAGAGCTCCCTGAAGGCTGGTTGGGTTGGTGAGGCCTGhide sequence |
Protein RefSeqs | NP_001165539 | (Get FASTA) | NCBI Sequence Viewer |
NP_001165540 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001165541 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001165542 | (Get FASTA) | NCBI Sequence Viewer | |
NP_082114 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH37443 | (Get FASTA) | NCBI Sequence Viewer |
BAB31304 | (Get FASTA) | NCBI Sequence Viewer | |
BAC33554 | (Get FASTA) | NCBI Sequence Viewer | |
BAE22881 | (Get FASTA) | NCBI Sequence Viewer | |
EDL25981 | (Get FASTA) | NCBI Sequence Viewer | |
EDL25982 | (Get FASTA) | NCBI Sequence Viewer | |
EDL25983 | (Get FASTA) | NCBI Sequence Viewer | |
EDL25984 | (Get FASTA) | NCBI Sequence Viewer | |
Q9D2Z4 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_082114 ⟸ NM_027838 |
- Peptide Label: | isoform a |
- UniProtKB: | Q9D2Z4 (UniProtKB/Swiss-Prot), A0A0R4J234 (UniProtKB/TrEMBL) |
- Sequence: |
MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVCFISPEVTQFIKChide sequence |
RefSeq Acc Id: | NP_001165539 ⟸ NM_001172068 |
- Peptide Label: | isoform a |
- UniProtKB: | Q9D2Z4 (UniProtKB/Swiss-Prot), A0A0R4J234 (UniProtKB/TrEMBL) |
- Sequence: |
MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVCFISPEVTQFIKChide sequence |
RefSeq Acc Id: | NP_001165540 ⟸ NM_001172069 |
- Peptide Label: | isoform a |
- UniProtKB: | Q9D2Z4 (UniProtKB/Swiss-Prot), A0A0R4J234 (UniProtKB/TrEMBL) |
- Sequence: |
MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVCFISPEVTQFIKChide sequence |
RefSeq Acc Id: | NP_001165541 ⟸ NM_001172070 |
- Peptide Label: | isoform a |
- UniProtKB: | Q9D2Z4 (UniProtKB/Swiss-Prot), Q3UWN3 (UniProtKB/TrEMBL), A0A0R4J234 (UniProtKB/TrEMBL) |
- Sequence: |
MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVCFISPEVTQFIKChide sequence |
RefSeq Acc Id: | NP_001165542 ⟸ NM_001172071 |
- Peptide Label: | isoform b |
- UniProtKB: | Q9D2Z4 (UniProtKB/Swiss-Prot), A0A1L1SRH8 (UniProtKB/TrEMBL) |
- Sequence: |
MLLEFLRIPAQYKMDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVhide sequence |
RGD ID: | 6844863 | |||||||||
Promoter ID: | MM_KWN:57625 | |||||||||
Type: | CpG-Island | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | MPROMDB | |||||||||
Tissues & Cell Lines: | 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen | |||||||||
Transcripts: | ENSMUST00000085572, NM_001172068, NM_001172069, NM_001172070, NM_001172071, NM_027838, OTTMUST00000086327, OTTMUST00000086328, OTTMUST00000086329, UC009PYQ.1 | |||||||||
Position: |
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RGD ID: | 8669854 | |||||||||
Promoter ID: | EPDNEW_M12957 | |||||||||
Type: | multiple initiation site | |||||||||
Name: | Senp8_1 | |||||||||
Description: | Mus musculus SUMO/sentrin specific peptidase 8 , transcript variant4, mRNA. | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | |||||||||
Experiment Methods: | Single-end sequencing. | |||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:1918849 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000051705 | ENTREZGENE, UniProtKB/Swiss-Prot |
Ensembl Protein | ENSMUSP00000054509 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUSP00000129441 | ENTREZGENE, UniProtKB/Swiss-Prot | |
ENSMUSP00000137228 | UniProtKB/Swiss-Prot | |
ENSMUSP00000149463 | ENTREZGENE, UniProtKB/TrEMBL | |
ENSMUSP00000150192 | ENTREZGENE, UniProtKB/TrEMBL | |
ENSMUSP00000150601 | ENTREZGENE, UniProtKB/Swiss-Prot | |
Ensembl Transcript | ENSMUST00000051039 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUST00000163586 | ENTREZGENE, UniProtKB/Swiss-Prot | |
ENSMUST00000177963 | UniProtKB/Swiss-Prot | |
ENSMUST00000213257 | ENTREZGENE, UniProtKB/TrEMBL | |
ENSMUST00000216329 | ENTREZGENE, UniProtKB/TrEMBL | |
ENSMUST00000217093 | ENTREZGENE, UniProtKB/Swiss-Prot | |
InterPro | Papain-like_cys_pep_sf | UniProtKB/Swiss-Prot |
Peptidase_C48_C | UniProtKB/Swiss-Prot | |
KEGG Report | mmu:71599 | UniProtKB/Swiss-Prot |
MGD | MGI:1918849 | ENTREZGENE |
NCBI Gene | 71599 | ENTREZGENE |
Pfam | Peptidase_C48 | UniProtKB/Swiss-Prot |
PhenoGen | Senp8 | PhenoGen |
PROSITE | ULP_PROTEASE | UniProtKB/Swiss-Prot |
Superfamily-SCOP | SSF54001 | UniProtKB/Swiss-Prot |
UniGene | Mm.279070 | ENTREZGENE |
UniProt | A0A0R4J234 | ENTREZGENE |
A0A1L1SRH8 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A1L1ST73_MOUSE | UniProtKB/TrEMBL | |
Q3UWN3 | ENTREZGENE, UniProtKB/TrEMBL | |
Q9D2Z4 | ENTREZGENE, UniProtKB/Swiss-Prot | |
UniProt Secondary | Q543P0 | UniProtKB/Swiss-Prot |
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More on Senp8 | |
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Alliance Gene |
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NCBI Gene |
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Ensembl Gene |
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JBrowse: mm9 mm10 |
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MGI Report |
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NCBI Genome Data Viewer |
CRRD Object Information | |
CRRD ID: | 1320577 |
Created: | 2005-01-12 |
Species: | Mus musculus |
Last Modified: | 2019-11-27 |
Status: | ACTIVE |
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.