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Gene: SLC46A2 (solute carrier family 46 member 2) Homo sapiens
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Symbol: SLC46A2
Name: solute carrier family 46 member 2
CRRD ID: 1321413
Description: Predicted to have transmembrane transporter activity. Involved in positive regulation of nucleotide-binding activity oligomerization domain containing 1 signaling pathway. Predicted to localize to cell surface; integral component of membrane; and plasma membrane; INTERACTS WITH 2-hydroxypropanoic acid; benzo[a]pyrene; calcitriol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Ly110; solute carrier family 46, member 2; thymic stromal co-transporter; thymic stromal cotransporter homolog; TSCOT
Orthologs:
Mus musculus (house mouse) : Slc46a2 (solute carrier family 46, member 2)  MGI  Alliance
Rattus norvegicus (Norway rat) : Slc46a2 (solute carrier family 46, member 2)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc46a2 (solute carrier family 46 member 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC46A2 (solute carrier family 46 member 2)
Canis lupus familiaris (dog) : SLC46A2 (solute carrier family 46 member 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc46a2 (solute carrier family 46 member 2)
Sus scrofa (pig) : SLC46A2 (solute carrier family 46 member 2)
Chlorocebus sabaeus (African green monkey) : SLC46A2 (solute carrier family 46 member 2)
Heterocephalus glaber (naked mole-rat) : Slc46a2 (solute carrier family 46 member 2)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl9112,878,920 - 112,890,876 (-)EnsemblGRCh38hg38GRCh38
GRCh389112,878,920 - 112,895,538 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh379115,641,200 - 115,653,193 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369114,681,021 - 114,692,866 (-)NCBINCBI36hg18NCBI36
Build 349112,720,755 - 112,732,600NCBI
Celera986,314,093 - 86,326,088 (+)NCBI
Cytogenetic Map9q32NCBI
HuRef985,239,036 - 85,251,012 (-)NCBIHuRef
CHM1_19115,788,488 - 115,800,474 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on SLC46A2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1321413
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2020-09-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.