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Gene: SS18 (SS18 subunit of BAF chromatin remodeling complex) Homo sapiens
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Symbol: SS18
Name: SS18 subunit of BAF chromatin remodeling complex
Description: Exhibits nuclear receptor transcription coactivator activity. Involved in positive regulation of transcription by RNA polymerase II. Localizes to the SWI/SNF complex. Implicated in synovial sarcoma; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-methylcholanthrene; all-trans-retinoic acid.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: MGC116875; SS18, nBAF chromatin remodeling complex subunit; SSXT; synovial sarcoma translocated to X chromosome protein; synovial sarcoma translocation, chromosome 18; synovial sarcoma, translocated to X chromosome; SYT; SYT-SSX1; SYT-SSX2
Orthologs:
Mus musculus (house mouse) : Ss18 (SS18, nBAF chromatin remodeling complex subunit)  MGI  Alliance
Rattus norvegicus (Norway rat) : Ss18 (SS18 subunit of BAF chromatin remodeling complex)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ss18 (SS18 subunit of BAF chromatin remodeling complex)
Pan paniscus (bonobo/pygmy chimpanzee) : SS18 (SS18 subunit of BAF chromatin remodeling complex)
Canis lupus familiaris (dog) : SS18 (SS18 subunit of BAF chromatin remodeling complex)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ss18 (SS18 subunit of BAF chromatin remodeling complex)
Sus scrofa (pig) : SS18 (SS18 subunit of BAF chromatin remodeling complex)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381826,016,253 - 26,091,217 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371823,596,217 - 23,671,176 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361821,850,215 - 21,924,609 (-)NCBINCBI36hg18NCBI36
Build 341821,850,216 - 21,924,609NCBI
Celera1820,410,686 - 20,485,111 (-)NCBI
Cytogenetic Map18q11.2NCBI
HuRef1820,453,679 - 20,528,047 (-)NCBIHuRef
CHM1_11823,523,494 - 23,598,474 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on SS18
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1323627
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2019-11-05
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.