Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: SPATC1 (spermatogenesis and centriole associated 1) Homo sapiens
Analyze
Symbol: SPATC1
Name: spermatogenesis and centriole associated 1
Description: Localizes to centrosome; INTERACTS WITH carbon nanotube; valproic acid; 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: MGC61633; SPATA15; speriolin; spermatogenesis and centriole-associated protein 1; spermatogenesis-associated protein 15; spermatogenic cell-specific Cdc20-binding protein; testicular tissue protein Li 181
Orthologs:
Mus musculus (house mouse) : Spatc1 (spermatogenesis and centriole associated 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Spatc1 (spermatogenesis and centriole associated 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Spatc1 (spermatogenesis and centriole associated 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SPATC1 (spermatogenesis and centriole associated 1)
Canis lupus familiaris (dog) : SPATC1 (spermatogenesis and centriole associated 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Spatc1 (spermatogenesis and centriole associated 1)
Sus scrofa (pig) : SPATC1 (spermatogenesis and centriole associated 1)
Chlorocebus sabaeus (African green monkey) : SPATC1 (spermatogenesis and centriole associated 1)
Heterocephalus glaber (naked mole-rat) : Spatc1 (spermatogenesis and centriole associated 1)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl8144,012,280 - 144,047,114 (+)EnsemblGRCh38hg38GRCh38
GRCh388144,010,992 - 144,047,114 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh378145,086,582 - 145,102,015 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 368145,158,595 - 145,174,003 (+)NCBINCBI36hg18NCBI36
Build 348145,158,594 - 145,174,002NCBI
Celera8141,422,681 - 141,430,005 (+)NCBI
Cytogenetic Map8q24.3NCBI
HuRef8140,342,636 - 140,377,833 (+)NCBIHuRef
CHM1_18145,126,831 - 145,142,275 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on SPATC1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1344287
Created: 2005-03-08
Species: Homo sapiens
Last Modified: 2020-03-24
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.