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Gene: HTATSF1 (HIV-1 Tat specific factor 1) Homo sapiens
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Symbol: HTATSF1
Name: HIV-1 Tat specific factor 1
Description: The protein encoded by this gene functions as a cofactor for the stimulation of transcriptional elongation by HIV-1 Tat, which binds to the HIV-1 promoter through Tat-TAR interaction. This protein may also serve as a dual-function factor to couple transcription and splicing and to facilitate their reciprocal activation. Alternatively spliced transcript variants have been found for this gene.[provided by RefSeq, Sep 2009]
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: cofactor required for Tat activation of HIV-1 transcription; dJ196E23.2; HIV TAT specific factor 1; HIV Tat-specific factor 1; TAT-SF1; TATSF1
Orthologs:
Mus musculus (house mouse) : Htatsf1 (HIV TAT specific factor 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Htatsf1 (HIV-1 Tat specific factor 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Htatsf1 (HIV-1 Tat specific factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : HTATSF1 (HIV-1 Tat specific factor 1)
Canis lupus familiaris (dog) : HTATSF1 (HIV-1 Tat specific factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Htatsf1 (HIV-1 Tat specific factor 1)
Sus scrofa (pig) : HTATSF1 (HIV-1 Tat specific factor 1)
more info ...
Related Pseudogenes: HTATSF1P1   HTATSF1P2  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X136,497,079 - 136,512,346 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X135,579,238 - 135,594,505 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X135,407,337 - 135,422,156 (+)NCBINCBI36hg18NCBI36
Build 34X135,305,190 - 135,320,009NCBI
CeleraX135,942,878 - 135,958,146 (+)NCBI
Cytogenetic MapXq26.3NCBI
HuRefX124,849,852 - 124,864,864 (+)NCBIHuRef
CHM1_1X135,490,891 - 135,506,159 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on HTATSF1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1344524
Created: 2005-03-08
Species: Homo sapiens
Last Modified: 2019-08-06
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.