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Gene: VSIG1 (V-set and immunoglobulin domain containing 1) Homo sapiens
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Symbol: VSIG1
Name: V-set and immunoglobulin domain containing 1
Description: This gene encodes a member of the junctional adhesion molecule (JAM) family. The encoded protein contains multiple glycosylation sites at the N-terminal region, and multiple phosphorylation sites and glutamic acid/proline (EP) repeats at the C-terminal region. The gene is expressed in normal stomach and testis, as well as in gastric, esophageal and ovarian cancers. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2009]
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: 1700062D20Rik; cell surface A33 antigen; dJ889N15.1; glycoprotein A34; GPA34; MGC44287; V-set and immunoglobulin domain-containing protein 1
Orthologs:
Mus musculus (house mouse) : Vsig1 (V-set and immunoglobulin domain containing 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Vsig1 (V-set and immunoglobulin domain containing 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vsig1 (V-set and immunoglobulin domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : VSIG1 (V-set and immunoglobulin domain containing 1)
Canis lupus familiaris (dog) : VSIG1 (V-set and immunoglobulin domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vsig1 (V-set and immunoglobulin domain containing 1)
Sus scrofa (pig) : VSIG1 (V-set and immunoglobulin domain containing 1)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X108,018,886 - 108,079,184 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X107,288,160 - 107,322,414 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X107,174,856 - 107,209,070 (+)NCBINCBI36hg18NCBI36
Build 34X107,094,344 - 107,128,558NCBI
CeleraX107,759,672 - 107,793,886 (+)NCBI
Cytogenetic MapXq22.3NCBI
HuRefX96,911,024 - 96,945,061 (+)NCBIHuRef
CHM1_1X107,199,027 - 107,233,291 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on VSIG1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1347101
Created: 2005-03-08
Species: Homo sapiens
Last Modified: 2019-08-06
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.