Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: TCFL5 (transcription factor like 5) Homo sapiens
Analyze
Symbol: TCFL5
Name: transcription factor like 5
Description: ENCODES a protein that exhibits DNA binding; DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II proximal promoter sequence-specific DNA binding; INVOLVED IN negative regulation of transcription by RNA polymerase II; regulation of cell differentiation; regulation of cell population proliferation; ASSOCIATED WITH epilepsy; multiple epiphyseal dysplasia; FOUND IN nucleus; nuclear chromatin (ortholog); INTERACTS WITH 2-methylcholine; all-trans-retinoic acid; antirheumatic drug
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: bHLHe82; CHA; cha transcription factor; E2BP-1; Figlb; HPV-16 E2 binding protein 1; HPV-16 E2-binding protein 1; MGC46135; SOSF1; spermatogenesis- and oogenesis-specific bHLH-containing protein 1; transcription factor-like 5 (basic helix-loop-helix); transcription factor-like 5 protein
Orthologs:
Mus musculus (house mouse) : Tcfl5 (transcription factor-like 5 (basic helix-loop-helix))  MGI  Alliance
Rattus norvegicus (Norway rat) : Tcfl5 (transcription factor like 5)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tcfl5 (transcription factor like 5)
Pan paniscus (bonobo/pygmy chimpanzee) : TCFL5 (transcription factor like 5)
Canis lupus familiaris (dog) : TCFL5 (transcription factor like 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tcfl5 (transcription factor like 5)
Sus scrofa (pig) : TCFL5 (transcription factor like 5)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382062,841,005 - 62,861,822 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372061,472,467 - 61,493,115 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362060,942,912 - 60,963,560 (-)NCBINCBI36hg18NCBI36
Build 342060,942,912 - 60,963,560NCBI
Celera2058,148,498 - 58,169,147 (-)NCBI
Cytogenetic Map20q13.33NCBI
HuRef2058,190,512 - 58,209,710 (-)NCBIHuRef
CHM1_12061,373,283 - 61,393,975 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on TCFL5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1348705
Created: 2005-03-08
Species: Homo sapiens
Last Modified: 2019-10-08
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.