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Gene: C9orf40 (chromosome 9 open reading frame 40) Homo sapiens
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Symbol: C9orf40
Name: chromosome 9 open reading frame 40
Description: INTERACTS WITH all-trans-retinoic acid; benzo[a]pyrene diol epoxide I; calcitriol
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: FLJ10110; FLJ25795; hypothetical protein LOC55071; uncharacterized protein C9orf40
Orthologs:
Mus musculus (house mouse) : D030056L22Rik (RIKEN cDNA D030056L22 gene)  MGI  Alliance
Rattus norvegicus (Norway rat) : LOC499331 (similar to hypothetical protein D030056L22)  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : C9H9orf40 (chromosome 9 C9orf40 homolog)
Canis lupus familiaris (dog) : C1H9orf40 (chromosome 1 C9orf40 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH9orf40 (chromosome unknown C9orf40 homolog)
Sus scrofa (pig) : C1H9orf40 (chromosome 1 C9orf40 homolog)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38974,946,583 - 74,952,912 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37977,561,499 - 77,567,802 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36976,751,319 - 76,757,622 (-)NCBINCBI36hg18NCBI36
Build 34974,791,431 - 74,797,356NCBI
Celera948,135,332 - 48,141,635 (-)NCBI
Cytogenetic Map9q21.13NCBI
HuRef947,383,471 - 47,389,771 (-)NCBIHuRef
CHM1_1977,707,780 - 77,714,083 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on C9orf40
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1350600
Created: 2005-03-08
Species: Homo sapiens
Last Modified: 2019-11-26
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.