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Gene: SCAF11 (SR-related CTD associated factor 11) Homo sapiens
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Symbol: SCAF11
Name: SR-related CTD associated factor 11
Description: Exhibits RNA binding activity. Involved in spliceosomal complex assembly. Localizes to the nuclear body and nucleolus; INTERACTS WITH (-)-demecolcine; (S)-nicotine; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: CASP11; CTD-associated SR protein 11; renal carcinoma antigen NY-REN-40; SC35-interacting protein 1; serine/arginine-rich splicing factor 2, interacting protein; serine/arginine-rich splicing factor 2-interacting protein; SFRS2-interacting protein; SFRS2IP; SIP1; splicing factor, arginine/serine-rich 2, interacting protein; splicing factor, arginine/serine-rich 2-interacting protein; splicing regulatory protein 129; SR-related and CTD-associated factor 11; SR-related CTD-associated factor 11; SRRP129; SRSF2-interacting protein; SRSF2IP
Orthologs:
Mus musculus (house mouse) : Scaf11 (SR-related CTD-associated factor 11)  MGI  Alliance
Rattus norvegicus (Norway rat) : Scaf11 (SR-related CTD-associated factor 11)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scaf11 (SR-related CTD associated factor 11)
Pan paniscus (bonobo/pygmy chimpanzee) : SCAF11 (SR-related CTD associated factor 11)
Canis lupus familiaris (dog) : SCAF11 (SR-related CTD associated factor 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scaf11 (SR-related CTD associated factor 11)
Sus scrofa (pig) : SCAF11 (SR-related CTD associated factor 11)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381245,919,131 - 45,992,040 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371246,312,914 - 46,385,898 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361244,599,181 - 44,670,668 (-)NCBINCBI36hg18NCBI36
Build 341244,601,458 - 44,610,015NCBI
Celera1245,110,253 - 45,181,745 (-)NCBI
Cytogenetic Map12q12NCBI
HuRef1243,343,703 - 43,415,274 (-)NCBIHuRef
CHM1_11246,277,803 - 46,349,280 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on SCAF11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1354010
Created: 2005-03-08
Species: Homo sapiens
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.