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Gene: Tram1 (translocation associated membrane protein 1) Rattus norvegicus
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Symbol: Tram1
Name: translocation associated membrane protein 1
Description: Predicted to be involved in SRP-dependent cotranslational protein targeting to membrane, translocation. Predicted to localize to the integral component of endoplasmic reticulum membrane and rough endoplasmic reticulum. Orthologous to human TRAM1 (translocation associated membrane protein 1); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH 17beta-estradiol; 4,4'-diaminodiphenylmethane; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC95042; translocating chain-associated membrane protein 1; translocating chain-associating membrane protein; translocating chain-associating membrane protein 1
Orthologs:
Homo sapiens (human) : TRAM1 (translocation associated membrane protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Tram1 (translocating chain-associating membrane protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tram1 (translocation associated membrane protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TRAM1 (translocation associated membrane protein 1)
Canis lupus familiaris (dog) : TRAM1 (translocation associated membrane protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tram1 (translocation associated membrane protein 1)
Sus scrofa (pig) : TRAM1 (translocation associated membrane protein 1)
Chlorocebus sabaeus (green monkey) : TRAM1 (translocation associated membrane protein 1)
Heterocephalus glaber (naked mole-rat) : Tram1 (translocation associated membrane protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Note: There is an assembly problem in the Rnor_6.0 reference genome assembly, and therefore, annotation of this gene is split across NW_007905800.1 and NW_007905801.1 in NCBI's Rattus norvegicus Annotation Release 105. [18 Jun 2015]
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.055,215,196 - 5,297,337 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl55,215,196 - 5,316,685 (+)Ensembl
Rnor_5.0510,121,579 - 10,138,210 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0510,062,171 - 10,062,451 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.454,844,208 - 4,869,207 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.154,844,207 - 4,869,206 (+)NCBI
Celera55,235,381 - 5,252,006 (+)NCBICelera
Cytogenetic Map5q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tram1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359100
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.