Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Slfn13 (schlafen family member 13) Rattus norvegicus
Analyze
Symbol: Slfn13
Name: schlafen family member 13
Description: Exhibits endoribonuclease activity and zinc ion binding activity. Involved in rRNA catabolic process and tRNA catabolic process. Predicted to localize to several cellular components, including the aggresome; cytosol; and nucleoplasm. Orthologous to human SLFN11 (schlafen family member 11) and SLFN13 (schlafen family member 13); INTERACTS WITH bisphenol A; copper atom; copper(0).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC303378; ribonuclease S13; RNase S13; rSLFN13; schlafen 8; schlafen family member 11; schlafen-13; schlafen13; similar to schlafen 8; Slfn8
Orthologs:
Homo sapiens (human) : SLFN11 (schlafen family member 11)  HGNC  Alliance
Mus musculus (house mouse) : Slfn9 (schlafen 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slfn11 (schlafen family member 11)
Pan paniscus (bonobo/pygmy chimpanzee) : SLFN11 (schlafen family member 11)
Sus scrofa (pig) : SLFN11 (schlafen family member 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01070,326,157 - 70,343,024 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01069,956,875 - 69,972,497 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41071,192,184 - 71,205,605 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11071,205,850 - 71,219,281 (-)NCBI
Celera1066,853,364 - 66,866,767 (-)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slfn13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359139
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.