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Gene: Pglyrp2 (peptidoglycan recognition protein 2) Rattus norvegicus
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Symbol: Pglyrp2
Name: peptidoglycan recognition protein 2
Description: Predicted to have N-acetylmuramoyl-L-alanine amidase activity; peptidoglycan binding activity; and peptidoglycan immune receptor activity. Predicted to be involved in several processes, including growth of symbiont in host; negative regulation of natural killer cell differentiation involved in immune response; and response to bacterium. Orthologous to human PGLYRP2 (peptidoglycan recognition protein 2); INTERACTS WITH rotenone; 17beta-estradiol (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC299567; LOC691291; N-acetylmuramoyl-L-alanine amidase; similar to peptidoglycan recognition protein 2; similar to Peptidoglycan recognition protein-like
Orthologs:
Homo sapiens (human) : PGLYRP2 (peptidoglycan recognition protein 2)  HGNC  Alliance
Mus musculus (house mouse) : Pglyrp2 (peptidoglycan recognition protein 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pglyrp2 (peptidoglycan recognition protein 2)
Pan paniscus (bonobo/pygmy chimpanzee) : PGLYRP2 (peptidoglycan recognition protein 2)
Canis lupus familiaris (dog) : PGLYRP2 (peptidoglycan recognition protein 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pglyrp2 (peptidoglycan recognition protein 2)
Sus scrofa (pig) : PGLYRP2 (peptidoglycan recognition protein 2)
Chlorocebus sabaeus (African green monkey) : PGLYRP2 (peptidoglycan recognition protein 2)
Heterocephalus glaber (naked mole-rat) : Pglyrp2 (peptidoglycan recognition protein 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0714,426,481 - 14,435,987 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl714,429,701 - 14,435,967 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0714,580,379 - 14,588,764 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4712,995,858 - 12,996,949 (-)NCBIRGSC3.4rn4RGSC3.4
Celera79,530,143 - 9,537,285 (-)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pglyrp2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359183
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2020-05-05
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.