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Gene: Cnot10 (CCR4-NOT transcription complex, subunit 10) Rattus norvegicus
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Symbol: Cnot10
Name: CCR4-NOT transcription complex, subunit 10
Description: Predicted to be involved in mRNA catabolic process and negative regulation of translation. Predicted to localize to CCR4-NOT complex. Orthologous to human CNOT10 (CCR4-NOT transcription complex subunit 10); PARTICIPATES IN microRNA pathway; RNA degradation pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CCR4-NOT transcription complex subunit 10; MGC94752; similar to RIKEN cDNA 2600001P13
Orthologs:
Homo sapiens (human) : CNOT10 (CCR4-NOT transcription complex subunit 10)  HGNC  Alliance
Mus musculus (house mouse) : Cnot10 (CCR4-NOT transcription complex, subunit 10)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cnot10 (CCR4-NOT transcription complex subunit 10)
Pan paniscus (bonobo/pygmy chimpanzee) : CNOT10 (CCR4-NOT transcription complex subunit 10)
Canis lupus familiaris (dog) : CNOT10 (CCR4-NOT transcription complex subunit 10)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cnot10 (CCR4-NOT transcription complex subunit 10)
Sus scrofa (pig) : CNOT10 (CCR4-NOT transcription complex subunit 10)
Chlorocebus sabaeus (African green monkey) : CNOT10 (CCR4-NOT transcription complex subunit 10)
Heterocephalus glaber (naked mole-rat) : Cnot10 (CCR4-NOT transcription complex subunit 10)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08122,634,681 - 122,696,466 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8122,634,685 - 122,679,720 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08121,945,846 - 122,008,281 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48119,007,192 - 119,057,079 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18119,026,930 - 119,076,816 (-)NCBI
Celera8113,527,188 - 113,576,800 (-)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cnot10
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359219
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.