Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Atl1 (atlastin GTPase 1) Rattus norvegicus
Analyze
Symbol: Atl1
Name: atlastin GTPase 1
Description: Exhibits GTP binding activity and GTPase activity. Involved in axonogenesis. Localizes to the Golgi cis cisterna and endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in hereditary sensory neuropathy type 1D and hereditary spastic paraplegia 3A. Orthologous to human ATL1 (atlastin GTPase 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; aldehydo-D-glucose; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: atlastin-1; atlastin-like; LOC362750; MGC109404; spastic paraplegia 3A homolog; spastic paraplegia 3A homolog (human); Spg3a
Orthologs:
Homo sapiens (human) : ATL1 (atlastin GTPase 1)  HGNC  Alliance
Mus musculus (house mouse) : Atl1 (atlastin GTPase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atl1 (atlastin GTPase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ATL1 (atlastin GTPase 1)
Canis lupus familiaris (dog) : ATL1 (atlastin GTPase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atl1 (atlastin GTPase 1)
Sus scrofa (pig) : ATL1 (atlastin GTPase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0692,229,764 - 92,370,428 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06101,678,899 - 101,819,542 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4691,979,260 - 92,077,664 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1691,982,715 - 92,081,117 (+)NCBI
Celera686,872,333 - 86,970,392 (+)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Atl1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359232
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.