Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Srsf6 (serine and arginine rich splicing factor 6) Rattus norvegicus
Analyze
Symbol: Srsf6
Name: serine and arginine rich splicing factor 6
Description: Predicted to have pre-mRNA binding activity. Involved in negative regulation of gene expression; negative regulation of type B pancreatic cell apoptotic process; and response to insulin. Localizes to the nucleus. Human ortholog(s) of this gene implicated in proliferative diabetic retinopathy and spermatogenic failure 3. Orthologous to human SRSF6 (serine and arginine rich splicing factor 6); PARTICIPATES IN spliceosome pathway; INTERACTS WITH bisphenol A; C60 fullerene; cadmium dichloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC362264; pre-mRNA-splicing factor SRP55; serine/arginine-rich splicing factor 6; Sfrs6; similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6 (SRP55-2)(isoform 2)); splicing factor, arginine/serine-rich 6
Orthologs:
Homo sapiens (human) : SRSF6 (serine and arginine rich splicing factor 6)  HGNC  Alliance
Mus musculus (house mouse) : Srsf6 (serine/arginine-rich splicing factor 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Srsf6 (serine and arginine rich splicing factor 6)
Pan paniscus (bonobo/pygmy chimpanzee) : SRSF6 (serine and arginine rich splicing factor 6)
Canis lupus familiaris (dog) : SRSF6 (serine and arginine rich splicing factor 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Srsf6 (serine and arginine rich splicing factor 6)
Sus scrofa (pig) : SRSF6 (serine and arginine rich splicing factor 6)
more info ...
Related Pseudogenes: LOC100359754  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03159,305,345 - 159,310,668 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03165,502,385 - 165,507,708 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43153,795,483 - 153,799,026 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13153,701,518 - 153,705,060 (+)NCBI
Celera3150,247,637 - 150,252,960 (+)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Srsf6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359241
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.