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Gene: Alx3 (ALX homeobox 3) Rattus norvegicus
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Symbol: Alx3
Name: ALX homeobox 3
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to be involved in embryonic morphogenesis; pattern specification process; and regulation of apoptotic process. Predicted to localize to the nucleus. Orthologous to human ALX3 (ALX homeobox 3); INTERACTS WITH 6-propyl-2-thiouracil; all-trans-retinoic acid; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: aristaless 3; aristaless-like homeobox 3; homeobox protein aristaless-like 3
Orthologs:
Homo sapiens (human) : ALX3 (ALX homeobox 3)  HGNC  Alliance
Mus musculus (house mouse) : Alx3 (aristaless-like homeobox 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Alx3 (ALX homeobox 3)
Pan paniscus (bonobo/pygmy chimpanzee) : ALX3 (ALX homeobox 3)
Canis lupus familiaris (dog) : ALX3 (ALX homeobox 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Alx3 (ALX homeobox 3)
Sus scrofa (pig) : ALX3 (ALX homeobox 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02210,376,510 - 210,386,928 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02229,848,442 - 229,853,533 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42203,156,009 - 203,157,503 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12203,118,763 - 203,120,257 (+)NCBI
Celera2187,880,150 - 187,890,555 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Alx3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359270
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.