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Gene: Tsku (tsukushi, small leucine rich proteoglycan) Rattus norvegicus
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Symbol: Tsku
Name: tsukushi, small leucine rich proteoglycan
CRRD ID: 1359311
Description: Predicted to have transforming growth factor beta binding activity. Predicted to be involved in several processes, including ciliary body morphogenesis; negative regulation of signal transduction; and telencephalon development. Predicted to localize to extracellular matrix; extracellular space; and plasma membrane. Orthologous to human TSKU (tsukushi, small leucine rich proteoglycan); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: early insulin-induced hepatic gene protein; Eiih; hepatic protein EIIH; leucine-rich repeat-containing protein 54; tsukushi; tsukushi small leucine rich proteoglycan homolog; tsukushi small leucine rich proteoglycan homolog (Xenopus laevis); tsukushin
Orthologs:
Homo sapiens (human) : TSKU (tsukushi, small leucine rich proteoglycan)  HGNC  Alliance
Mus musculus (house mouse) : Tsku (tsukushi, small leucine rich proteoglycan)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tsku (tsukushi, small leucine rich proteoglycan)
Pan paniscus (bonobo/pygmy chimpanzee) : TSKU (tsukushi, small leucine rich proteoglycan)
Canis lupus familiaris (dog) : TSKU (tsukushi, small leucine rich proteoglycan)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tsku (tsukushi, small leucine rich proteoglycan)
Sus scrofa (pig) : TSKU (tsukushi, small leucine rich proteoglycan)
Chlorocebus sabaeus (African green monkey) : TSKU (tsukushi, small leucine rich proteoglycan)
Heterocephalus glaber (naked mole-rat) : Tsku (tsukushi, small leucine rich proteoglycan)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01163,317,281 - 163,328,697 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1163,317,282 - 163,328,591 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01169,524,020 - 169,535,831 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41155,611,069 - 155,622,378 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11155,689,480 - 155,700,780 (-)NCBI
Celera1150,750,146 - 150,761,455 (-)NCBICelera
Cytogenetic Map1q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tsku
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359311
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.