Gene: Lhfpl5 (LHFPL tetraspan subfamily member 5) Rattus norvegicus
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Symbol: Lhfpl5
Name: LHFPL tetraspan subfamily member 5
Description: Predicted to be involved in auditory receptor cell stereocilium organization and detection of mechanical stimulus involved in sensory perception of sound; predicted to localize to the apical plasma membrane and stereocilium tip; orthologous to human LHFPL5 (LHFPL tetraspan subfamily member 5); INTERACTS WITH bisphenol A; cadmium dichloride; copper atom.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: lipoma HMGIC fusion partner-like 5; lipoma HMGIC fusion partner-like 5 protein; tetraspan membrane protein of hair cell stereocilia; tetraspan transmembrane protein, hair cell stereocilia; Tmhs
Orthologs:
Homo sapiens (human) : LHFPL5 (LHFPL tetraspan subfamily member 5)  HGNC  Alliance
Mus musculus (house mouse) : Lhfpl5 (lipoma HMGIC fusion partner-like 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lhfpl5 (LHFPL tetraspan subfamily member 5)
Pan paniscus (bonobo/pygmy chimpanzee) : LHFPL5 (LHFPL tetraspan subfamily member 5)
Canis lupus familiaris (dog) : LHFPL5 (LHFPL tetraspan subfamily member 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lhfpl5 (LHFPL tetraspan subfamily member 5)
Sus scrofa (pig) : LHFPL5 (LHFPL tetraspan subfamily member 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0205,815,837 - 5,826,137 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0207,851,367 - 7,861,667 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4206,814,056 - 6,824,225 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1206,814,282 - 6,824,452 (+)NCBI
Celera208,188,650 - 8,198,670 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lhfpl5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359370
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.