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Gene: Ficd (FIC domain protein adenylyltransferase) Rattus norvegicus
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Symbol: Ficd
Name: FIC domain protein adenylyltransferase
Description: Predicted to have several functions, including ATP binding activity; Hsp70 protein binding activity; and chaperone binding activity. Predicted to be involved in cellular protein modification process; regulation of IRE1-mediated unfolded protein response; and response to endoplasmic reticulum stress. Predicted to localize to the integral component of endoplasmic reticulum membrane. Orthologous to human FICD (FIC domain containing); INTERACTS WITH bisphenol A; metformin; tetrachloromethane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: adenosine monophosphate-protein transferase FICD; AMPylator FICD; de-AMPylase FICD; FIC domain containing; FIC domain-containing protein; huntingtin interactor protein E; LOC288741
Orthologs:
Homo sapiens (human) : FICD (FIC domain protein adenylyltransferase)  HGNC  Alliance
Mus musculus (house mouse) : Ficd (FIC domain containing)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ficd (FIC domain protein adenylyltransferase)
Pan paniscus (bonobo/pygmy chimpanzee) : FICD (FIC domain protein adenylyltransferase)
Canis lupus familiaris (dog) : FICD (FIC domain protein adenylyltransferase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ficd (FIC domain protein adenylyltransferase)
Sus scrofa (pig) : FICD (FIC domain protein adenylyltransferase)
Chlorocebus sabaeus (African green monkey) : FICD (FIC domain protein adenylyltransferase)
Heterocephalus glaber (naked mole-rat) : Ficd (FIC domain protein adenylyltransferase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01248,658,283 - 48,663,175 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1248,658,283 - 48,663,143 (-)Ensembl
Rnor_5.01250,440,239 - 50,445,246 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41243,924,661 - 43,927,515 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11243,788,050 - 43,790,903 (-)NCBI
Celera1244,492,066 - 44,494,920 (-)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ficd
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359391
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2020-01-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.