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Gene: Trub2 (TruB pseudouridine synthase family member 2) Rattus norvegicus
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Symbol: Trub2
Name: TruB pseudouridine synthase family member 2
Description: Predicted to have RNA binding activity and pseudouridine synthase activity. Predicted to be involved in positive regulation of mitochondrial translation. Predicted to localize to the cytosol. Orthologous to human TRUB2 (TruB pseudouridine synthase family member 2); INTERACTS WITH 3-chloropropane-1,2-diol; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC366012; mitochondrial mRNA pseudouridine synthase Trub2; probable tRNA pseudouridine synthase 2; similar to RIKEN cDNA G430055L02; TruB pseudouridine (psi) synthase family member 2; TruB pseudouridine (psi) synthase homolog 2 (E. coli)
Orthologs:
Homo sapiens (human) : TRUB2 (TruB pseudouridine synthase family member 2)  HGNC  Alliance
Mus musculus (house mouse) : Trub2 (TruB pseudouridine (psi) synthase family member 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trub2 (TruB pseudouridine synthase family member 2)
Pan paniscus (bonobo/pygmy chimpanzee) : TRUB2 (TruB pseudouridine synthase family member 2)
Canis lupus familiaris (dog) : TRUB2 (TruB pseudouridine synthase family member 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trub2 (TruB pseudouridine synthase family member 2)
Sus scrofa (pig) : TRUB2 (TruB pseudouridine synthase family member 2)
more info ...
Related Pseudogenes: LOC100909699   LOC100909756   Trub2-ps1   Trub2-ps2  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.038,338,479 - 8,348,746 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0313,681,668 - 13,691,935 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.438,769,049 - 8,774,733 (-)NCBIRGSC3.4rn4RGSC3.4
Celera37,827,370 - 7,837,496 (-)NCBICelera
Cytogenetic Map3p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trub2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359394
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.