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Gene: Trim10 (tripartite motif-containing 10) Rattus norvegicus
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Symbol: Trim10
Name: tripartite motif-containing 10
CRRD ID: 1359438
Description: Predicted to have ubiquitin protein ligase activity. Predicted to be involved in several processes, including erythrocyte differentiation; negative regulation of viral entry into host cell; and protein ubiquitination. Predicted to localize to cytoplasm. Orthologous to human TRIM10 (tripartite motif containing 10); INTERACTS WITH bisphenol A; cadmium dichloride; endosulfan.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Rfb30; Rnf9; tripartite motif protein 10; tripartite motif-containing protein 10
Orthologs:
Homo sapiens (human) : TRIM10 (tripartite motif containing 10)  HGNC  Alliance
Mus musculus (house mouse) : Trim10 (tripartite motif-containing 10)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim10 (tripartite motif containing 10)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM10 (tripartite motif containing 10)
Canis lupus familiaris (dog) : TRIM10 (tripartite motif containing 10)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim10 (tripartite motif containing 10)
Sus scrofa (pig) : TRIM10 (tripartite motif containing 10)
Chlorocebus sabaeus (African green monkey) : TRIM10 (tripartite motif containing 10)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0202,182,945 - 2,191,640 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl202,182,941 - 2,191,640 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0204,219,702 - 4,228,396 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4201,781,869 - 1,790,921 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1201,781,952 - 1,790,843 (-)NCBI
Celera202,398,517 - 2,406,997 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trim10
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359438
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.