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Gene: Tmem39b (transmembrane protein 39b) Rattus norvegicus
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Symbol: Tmem39b
Name: transmembrane protein 39b
Description: Predicted to localize to integral component of membrane. Orthologous to human TMEM39B (transmembrane protein 39B); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362608; similar to hypothetical protein FLJ10315
Orthologs:
Homo sapiens (human) : TMEM39B (transmembrane protein 39B)  HGNC  Alliance
Mus musculus (house mouse) : Tmem39b (transmembrane protein 39b)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tmem39b (transmembrane protein 39B)
Pan paniscus (bonobo/pygmy chimpanzee) : TMEM39B (transmembrane protein 39B)
Canis lupus familiaris (dog) : TMEM39B (transmembrane protein 39B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tmem39b (transmembrane protein 39B)
Sus scrofa (pig) : TMEM39B (transmembrane protein 39B)
Chlorocebus sabaeus (African green monkey) : TMEM39B (transmembrane protein 39B)
Heterocephalus glaber (naked mole-rat) : Tmem39b (transmembrane protein 39B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05147,889,871 - 147,910,057 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5147,889,876 - 147,907,733 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05151,617,690 - 151,638,442 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.15148,824,847 - 148,861,612 (-)NCBI
Celera5140,497,824 - 140,519,981 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tmem39b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359450
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.