Gene: Pou5f1 (POU class 5 homeobox 1) Rattus norvegicus
Analyze
Symbol: Pou5f1
Name: POU class 5 homeobox 1
Description: Exhibits several functions, including DNA-binding transcription factor activity, protein domain specific binding activity, and sequence-specific DNA binding activity; involved in regulation of transcription, DNA-templated and response to cytokine; localizes to the nucleus; orthologous to several human genes including POU5F1 (POU class 5 homeobox 1); PARTICIPATES IN hypoxia inducible factor pathway; INTERACTS WITH 3-isobutyl-1-methyl-7H-xanthine; all-trans-retinoic acid; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: POU domain, class 5, transcription factor 1
Orthologs:
Homo sapiens (human) : POU5F1 (POU class 5 homeobox 1)  HGNC  Alliance
Mus musculus (house mouse) : Pou5f1 (POU domain, class 5, transcription factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pou5f1 (POU class 5 homeobox 1)
Pan paniscus (bonobo/pygmy chimpanzee) : POU5F1 (POU class 5 homeobox 1)
Canis lupus familiaris (dog) : POU5F1 (POU class 5 homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pou5f1 (POU class 5 homeobox 1)
Sus scrofa (pig) : POU5F1 (POU class 5 homeobox 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0203,747,231 - 3,751,994 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0205,833,973 - 5,838,736 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera20650,325 - 655,095 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pou5f1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359491
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.