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Gene: Scly (selenocysteine lyase) Rattus norvegicus
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Symbol: Scly
Name: selenocysteine lyase
Description: Exhibits several functions, including protein homodimerization activity; selenocysteine lyase activity; and vitamin B6 binding activity. Involved in selenocysteine catabolic process. Localizes to the catalytic complex. Orthologous to human SCLY (selenocysteine lyase); PARTICIPATES IN selenoamino acid metabolic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3H-1,2-dithiole-3-thione; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: MGC94824; similar to selenocysteine lyase
Orthologs:
Homo sapiens (human) : SCLY (selenocysteine lyase)  HGNC  Alliance
Mus musculus (house mouse) : Scly (selenocysteine lyase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scly (selenocysteine lyase)
Pan paniscus (bonobo/pygmy chimpanzee) : SCLY (selenocysteine lyase)
Canis lupus familiaris (dog) : SCLY (selenocysteine lyase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scly (selenocysteine lyase)
Sus scrofa (pig) : SCLY (selenocysteine lyase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0998,438,408 - 98,459,075 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl998,438,439 - 98,459,080 (+)Ensembl
Rnor_5.0998,114,955 - 98,135,548 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4990,525,575 - 90,546,159 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1990,730,343 - 90,750,927 (+)NCBI
Celera989,432,258 - 89,449,336 (+)NCBICelera
Cytogenetic Map9q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Scly
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359514
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.