Gene: Cln8 (CLN8, transmembrane ER and ERGIC protein) Rattus norvegicus
Analyze
Symbol: Cln8
Name: CLN8, transmembrane ER and ERGIC protein
Description: Predicted to be involved in several processes, including adult walking behavior, age-dependent response to oxidative stress, and animal organ development; predicted to localize to the endoplasmic reticulum and endoplasmic reticulum-Golgi intermediate compartment; orthologous to human CLN8 (CLN8 transmembrane ER and ERGIC protein); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ceroid-lipofuscinosis, neuronal 8; ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation); MGC93871
Orthologs:
Homo sapiens (human) : CLN8 (CLN8 transmembrane ER and ERGIC protein)  HGNC  Alliance
Mus musculus (house mouse) : Cln8 (ceroid-lipofuscinosis, neuronal 8)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cln8 (CLN8 transmembrane ER and ERGIC protein)
Pan paniscus (bonobo/pygmy chimpanzee) : CLN8 (CLN8 transmembrane ER and ERGIC protein)
Canis lupus familiaris (dog) : CLN8 (CLN8 transmembrane ER and ERGIC protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cln8 (CLN8 transmembrane ER and ERGIC protein)
Sus scrofa (pig) : CLN8 (CLN8 transmembrane ER and ERGIC protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01679,828,321 - 79,838,212 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01679,403,685 - 79,413,576 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41679,569,745 - 79,579,636 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11679,570,012 - 79,579,901 (-)NCBI
Celera1672,565,615 - 72,575,506 (-)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cln8
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359518
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.