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Gene: Clec4a3 (C-type lectin domain family 4, member A3) Rattus norvegicus
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Symbol: Clec4a3
Name: C-type lectin domain family 4, member A3
Description: Predicted to have calcium ion binding activity and mannose binding activity. Predicted to be involved in several processes, including antigen processing and presentation of exogenous peptide antigen via MHC class I; negative regulation of tumor necrosis factor production; and plasmacytoid dendritic cell antigen processing and presentation. Predicted to localize to the integral component of membrane. Orthologous to human CLEC4A (C-type lectin domain family 4 member A); INTERACTS WITH 1,3-dinitrobenzene; 1-naphthyl isothiocyanate; 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: antigen-presenting cell lectin-like receptor complex APLEC; Dcir3; dendritic cell inhibitory receptor 3
Orthologs:
Homo sapiens (human) : CLEC4A (C-type lectin domain family 4 member A)  HGNC  Alliance
Mus musculus (house mouse) : Clec4a1 (C-type lectin domain family 4, member a1)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : CLEC4A (C-type lectin domain family 4 member A)
Canis lupus familiaris (dog) : CLEC4A (C-type lectin domain family 4, member A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clec4a (C-type lectin domain family 4 member A)
Sus scrofa (pig) : LOC110258709 (C-type lectin domain family 4 member A-like)
more info ...
Is Marker For: Strains:   DA.E3-(D4Wox49-D4Got136)/Rhd  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04155,913,366 - 155,923,079 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04222,933,145 - 222,943,978 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44159,464,410 - 159,474,023 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14159,709,345 - 159,718,959 (+)NCBI
Celera4145,032,051 - 145,041,552 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Clec4a3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359528
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.