Gene: Sp100 (SP100 nuclear antigen) Rattus norvegicus
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Symbol: Sp100
Name: SP100 nuclear antigen
Description: Predicted to have several functions, including DNA-binding transcription factor activity, RNA polymerase II-specific, chromo shadow domain binding activity, and kinase binding activity; predicted to be involved in several processes, including innate immune response, regulation of cellular biosynthetic process, and regulation of signal transduction; predicted to colocalize with the Mre11 complex; orthologous to several human genes including SP100 (SP100 nuclear antigen); INTERACTS WITH bisphenol A; lead diacetate; (-)-demecolcine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC363269; nuclear antigen Sp100; nuclear autoantigen Sp-100; similar to Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear dot-associated Sp100 protein)
Orthologs:
Homo sapiens (human) : SP100 (SP100 nuclear antigen)  HGNC  Alliance
Mus musculus (house mouse) : Sp100 (nuclear antigen Sp100)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sp100 (SP100 nuclear antigen)
Pan paniscus (bonobo/pygmy chimpanzee) : SP100 (SP100 nuclear antigen)
Canis lupus familiaris (dog) : SP100 (SP100 nuclear antigen)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sp100 (SP100 nuclear antigen)
Sus scrofa (pig) : LOC100517129 (nuclear body protein SP140-like protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0992,675,103 - 92,718,489 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0992,405,689 - 92,449,075 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0990,732,749 - 90,750,820 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4984,374,288 - 84,409,976 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1984,557,706 - 84,593,391 (+)NCBI
Celera983,734,331 - 83,769,903 (+)NCBICelera
Cytogenetic Map9q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sp100
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359550
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.