Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Cdk9 (cyclin-dependent kinase 9) Rattus norvegicus
Analyze
Symbol: Cdk9
Name: cyclin-dependent kinase 9
Description: Exhibits chromatin binding activity and transcription factor binding activity. Involved in positive regulation of cardiac muscle hypertrophy and response to drug. Localizes to the nucleus. Orthologous to human CDK9 (cyclin dependent kinase 9); PARTICIPATES IN RNA polymerase II transcription elongation pathway; RNA polymerase II transcription pathway; INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 2,4-dinitrotoluene; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cell division protein kinase 9; cyclin-dependent kinase 9 (CDC2-related kinase); MGC95175
Orthologs:
Homo sapiens (human) : CDK9 (cyclin dependent kinase 9)  HGNC  Alliance
Mus musculus (house mouse) : Cdk9 (cyclin-dependent kinase 9 (CDC2-related kinase))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cdk9 (cyclin dependent kinase 9)
Pan paniscus (bonobo/pygmy chimpanzee) : CDK9 (cyclin dependent kinase 9)
Canis lupus familiaris (dog) : CDK9 (cyclin dependent kinase 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cdk9 (cyclin dependent kinase 9)
Sus scrofa (pig) : CDK9 (cyclin dependent kinase 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0311,742,269 - 11,747,117 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0317,081,164 - 17,086,012 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4311,672,861 - 11,677,709 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1311,569,232 - 11,574,081 (-)NCBI
Celera310,737,357 - 10,742,205 (-)NCBICelera
Cytogenetic Map3p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cdk9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359638
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.