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Gene: Igsf5 (immunoglobulin superfamily, member 5) Rattus norvegicus
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Symbol: Igsf5
Name: immunoglobulin superfamily, member 5
Description: Predicted to have PDZ domain binding activity. Predicted to be involved in cell-cell adhesion. Predicted to localize to the bicellular tight junction and cell surface. Orthologous to human IGSF5 (immunoglobulin superfamily member 5); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cell adhesion molecule JCAM; immunoglobulin superfamily member 5; JAM-4; Jam4; junctional adhesion molecule 4; LOC304000
Orthologs:
Homo sapiens (human) : IGSF5 (immunoglobulin superfamily member 5)  HGNC  Alliance
Mus musculus (house mouse) : Igsf5 (immunoglobulin superfamily, member 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Igsf5 (immunoglobulin superfamily member 5)
Pan paniscus (bonobo/pygmy chimpanzee) : IGSF5 (immunoglobulin superfamily member 5)
Canis lupus familiaris (dog) : IGSF5 (immunoglobulin superfamily member 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Igsf5 (immunoglobulin superfamily member 5)
Sus scrofa (pig) : IGSF5 (immunoglobulin superfamily member 5)
Chlorocebus sabaeus (green monkey) : IGSF5 (immunoglobulin superfamily member 5)
Heterocephalus glaber (naked mole-rat) : Igsf5 (immunoglobulin superfamily member 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01136,736,580 - 36,779,614 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1136,736,586 - 36,779,615 (+)Ensembl
Rnor_5.01140,264,840 - 40,305,321 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41136,698,885 - 36,755,559 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11136,756,473 - 36,813,146 (+)NCBI
Celera1132,750,117 - 32,790,934 (-)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Igsf5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359642
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.