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Gene: Cldn18 (claudin 18) Rattus norvegicus
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Symbol: Cldn18
Name: claudin 18
Description: Predicted to have structural molecule activity. Involved in response to ethanol. Predicted to localize to the bicellular tight junction; integral component of membrane; and plasma membrane. Orthologous to human CLDN18 (claudin 18); PARTICIPATES IN hepatitis C pathway; INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: claudin 18-like; claudin-18; LOC315953; similar to claudin-18A1.2
Orthologs:
Homo sapiens (human) : CLDN18 (claudin 18)  HGNC  Alliance
Mus musculus (house mouse) : Cldn18 (claudin 18)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cldn18 (claudin 18)
Pan paniscus (bonobo/pygmy chimpanzee) : CLDN18 (claudin 18)
Canis lupus familiaris (dog) : CLDN18 (claudin 18)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cldn18 (claudin 18)
Sus scrofa (pig) : CLDN18 (claudin 18)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08107,933,725 - 107,960,656 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08107,357,500 - 107,384,348 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48104,560,892 - 104,578,313 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18104,580,347 - 104,597,768 (-)NCBI
Celera899,648,512 - 99,666,002 (-)NCBICelera
Cytogenetic Map8q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cldn18
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359696
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.